MMsInc Molecule/ Ligand PDB

Ligands with its PDB code and its tanimoto calculated from the molecule, present in the database, which has for MMscode: MMs03417489

You can sort the columns by Ligand, Ligand name, PDB and Tanimoto.

Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
GP4	GLUCOSAMINE 4-PHOSPHATE	A	1FCP	0.7
GP4	GLUCOSAMINE 4-PHOSPHATE	A,B,C	1Q9W	0.7
GP4	GLUCOSAMINE 4-PHOSPHATE	A	2FCP	0.7
GCS	D-GLUCOSAMINE	A	3CO4	0.77
GCS	D-GLUCOSAMINE	A	1QGI	0.77
GCS	D-GLUCOSAMINE	A,B	2VZS	0.77
GCS	D-GLUCOSAMINE	A	1E9L	0.77
GCS	D-GLUCOSAMINE	A,B,C,D	3FXI	0.77
GCS	D-GLUCOSAMINE	A,B	2VZV	0.77
N30	(1R,2R,3S,4R,6S)-4,6-DIAMINO-2- [(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)OXY]- 3-HYDROXYCYCLOHEXYL 2-AMINO-2-DEOXY- ALPHA-D-GLUCOPYRANOSIDE	B	2O3X	0.73
PA1	PAROMOMYCIN (RING 1)	A	1PBR	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QKC	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QFG	0.77
PA1	PAROMOMYCIN (RING 1)	A	1FI1	0.77
PA1	PAROMOMYCIN (RING 1)	A,B,C,D	3FXI	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QFF	0.77
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	2PIK	0.79
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	6CGT	0.79
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A,B	1PIK	0.79
AC1	6-METHYL-5-(4,5,6-TRIHYDROXY-3- HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)- TETRAHYDRO-PYRAN-2,3,4-TRIOL	A	1W9X	0.71
AC1	6-METHYL-5-(4,5,6-TRIHYDROXY-3- HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)- TETRAHYDRO-PYRAN-2,3,4-TRIOL	A	1B2Y	0.71
AC1	6-METHYL-5-(4,5,6-TRIHYDROXY-3- HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)- TETRAHYDRO-PYRAN-2,3,4-TRIOL	A	1HX0	0.71
AC1	6-METHYL-5-(4,5,6-TRIHYDROXY-3- HYDROXYMETHYL-CYCLOHEX-2-ENYLAMINO)- TETRAHYDRO-PYRAN-2,3,4-TRIOL	A	1OSE	0.71
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ9	0.76
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ4	0.76
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B,C	1Q9W	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B	2OI6	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	2FCP	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1FCP	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1UJW	0.7
MYG	GLUCOSAMINYL-(ALPHA-6)-D-MYO-INOSITOL	A	1GYM	0.79
AOG	4-AMINO-2-OCTYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R82	0.82
3SA	ACARBOSE DERIVED TRISACCHARIDE	A	1XCW	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1FQ9	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B	2AXM	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1GMN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1T8U	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFB	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B,D,F,H	1XMN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F, G,H	1GMO	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F	1AXM	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1XT3	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1QQP	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1RID	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1G5N	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	2BRS	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1HPN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1ZA4	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1ZBA	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFC	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D	2VRA	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYV	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	H,I	3B9F	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	3DY0	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYU	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B,C,D,E	1E0O	0.7
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1CPU	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1NM9	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFV	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1PIG	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	1Z32	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFU	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3BLK	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	3BLP	0.79
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3DHP	0.79
MUR	MURAMIC ACID	A,C,E,G	1LOD	0.71
PAR	PAROMOMYCIN	A	1FYP	0.71
PAR	PAROMOMYCIN	V,Z	2J02	0.71
PAR	PAROMOMYCIN	Z	2UXD	0.71
PAR	PAROMOMYCIN	A,D,N,Y,Z	1N33	0.71
PAR	PAROMOMYCIN	V,Y,Z	2WDM	0.71
PAR	PAROMOMYCIN	Y,Z	2VQE	0.71
PAR	PAROMOMYCIN	A,D,L,N	1IBK	0.71
PAR	PAROMOMYCIN	Z	2UXB	0.71
PAR	PAROMOMYCIN	Y,Z	2UU9	0.71
PAR	PAROMOMYCIN	Z	2UXC	0.71
PAR	PAROMOMYCIN	A,D,N,X	1XMQ	0.71
PAR	PAROMOMYCIN	B	2O3W	0.71
PAR	PAROMOMYCIN	V,Y,Z	2WDG	0.71
PAR	PAROMOMYCIN	A	2Z4K	0.71
PAR	PAROMOMYCIN	4,B	2Z4N	0.71
PAR	PAROMOMYCIN	V,Y,Z	2WDK	0.71
PAR	PAROMOMYCIN	A,E	2Z4M	0.71
PAR	PAROMOMYCIN	A,B,C,D	3BNQ	0.71
PAR	PAROMOMYCIN	Y,Z	2UUB	0.71
PAR	PAROMOMYCIN	A,D,H,N	1FJG	0.71
PAR	PAROMOMYCIN	A,B	1J7T	0.71
PAR	PAROMOMYCIN	Y,Z	2UUA	0.71
PAR	PAROMOMYCIN	Y,Z	2UUC	0.71
PAR	PAROMOMYCIN	A,D,J,N,X	1XNQ	0.71
PAR	PAROMOMYCIN	A,D,E,J,M,N,Y	1N32	0.71
PAR	PAROMOMYCIN	A	2VQY	0.71
PAR	PAROMOMYCIN	A,B	3C44	0.71
PAR	PAROMOMYCIN	V,Z	2J00	0.71
PAR	PAROMOMYCIN	4,B	2Z4L	0.71
PAR	PAROMOMYCIN	V,Y,Z	2WDH	0.71
PAR	PAROMOMYCIN	A,D,J,N,Y	1IBL	0.71
PAR	PAROMOMYCIN	A,B,C,D	3BNR	0.71
PAR	PAROMOMYCIN	A,D,J,N,X	1XMO	0.71
PAR	PAROMOMYCIN	Y,Z	2VQF	0.71
PAR	PAROMOMYCIN	A,D,J,N,X	1XNR	0.71
GDA	4-DEOXY-4-AMINO-BETA-D-GLUCOSE	A,B	1OCB	0.8
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1QD3	0.78
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	B	1O9M	0.78
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1NEM	0.78
KAN	KANAMYCIN A	A	1L8T	0.73
KAN	KANAMYCIN A	A,B	1M4I	0.73
KAN	KANAMYCIN A	A,B	1ND4	0.73
KAN	KANAMYCIN A	A,B	1KNY	0.73
KAN	KANAMYCIN A	A,B	2ESI	0.73
GNS	N-SULFO-ALPHA-D-GLUCOSAMINE	A	2ERM	0.71
ABL	6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY- 6-HYDROXYMETHYL-TETRAHYDRO-PYRAN- 2-YLOXY)-PIPERIDINE-2,3,4-TRIOL	A,B	1NAA	0.72
ABL	6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY- 6-HYDROXYMETHYL-TETRAHYDRO-PYRAN- 2-YLOXY)-PIPERIDINE-2,3,4-TRIOL	A	2AXR	0.72
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	2TOB	0.77
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	1TOB	0.77
GLP	GLUCOSAMINE 6-PHOSPHATE	E,F,G,H,P,Q, R,S	2NZ4	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A	1MOQ	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A	3CXQ	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4A	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4C	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4B	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2VHL	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2Z75	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	X	2VF5	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2RI1	0.7
KNC	KANAMYCIN C	A	1V0C	0.73
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7Y	0.86
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7X	0.86
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R81	0.86
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7V	0.86
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R80	0.86
9CS	(1R,2S,3S,4R,6S)-4,6-DIAMINO-3- [(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]- 2-HYDROXYCYCLOHEXYL 2,6-DIAMINO- 2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE	A	2QIR	0.73
GCN	3-DEOXY-D-GLUCOSAMINE	A	1FI1	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFG	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QKC	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A,B	2GRX	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QJQ	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFF	0.77
TOA	3-DEOXY-3-AMINO GLUCOSE	A	1TOB	0.81
TOA	3-DEOXY-3-AMINO GLUCOSE	A	2TOB	0.81
AF1	4,6-dideoxy-4-{[(1S,4S,5S,6S)-4,5,6- trihydroxy-3-(hydroxymethyl)cyclohex- 2-en-1-yl]amino}-beta-D-glucopyranose	A	1BG9	0.71
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1QD3	0.78
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1NEM	0.78
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1PBR	0.78
TOY	TOBRAMYCIN	A,B	1M4D	0.73
TOY	TOBRAMYCIN	A,B	1LC4	0.73
RIO	RIBOSTAMYCIN	A,B	1M4G	0.73
RIO	RIBOSTAMYCIN	A,B	3C3Z	0.73
RIO	RIBOSTAMYCIN	A,B	1S3Z	0.73
RIO	RIBOSTAMYCIN	A,B,C,D	2FCZ	0.73
RIO	RIBOSTAMYCIN	A,B	2ET5	0.73
RIO	RIBOSTAMYCIN	A,B	3DVV	0.73
RIO	RIBOSTAMYCIN	A	2BUE	0.73
1GN	2-DEOXY-2-AMINOGALACTOSE	A,B	3GAL	0.77
NMY	NEOMYCIN	A	2B0Q	0.71
NMY	NEOMYCIN	4,B	2QP1	0.71
NMY	NEOMYCIN	A,B	2ET4	0.71
NMY	NEOMYCIN	A,E,N	2QAN	0.71
NMY	NEOMYCIN	A,B	2FCY	0.71
NMY	NEOMYCIN	A	2QP0	0.71
NMY	NEOMYCIN	A	1I9V	0.71
NMY	NEOMYCIN	A	2QAL	0.71
NMY	NEOMYCIN	4,B	2QOZ	0.71
NMY	NEOMYCIN	A,C	2A04	0.71
NMY	NEOMYCIN	A	1EI2	0.71
NMY	NEOMYCIN	A,B	3C7R	0.71
NMY	NEOMYCIN	4,B	2QAM	0.71
NMY	NEOMYCIN	4,B	2QAO	0.71
NMY	NEOMYCIN	A	2QOY	0.71
N33		A	2O3V	0.73
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2F4S	0.77
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	A,B	2FCX	0.77
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2ET8	0.77