MMsInc Molecule/ Ligand PDB

Ligands with its PDB code and its tanimoto calculated from the molecule, present in the database, which has for MMscode: MMs02508911

You can sort the columns by Ligand, Ligand name, PDB and Tanimoto.

Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
N30	(1R,2R,3S,4R,6S)-4,6-DIAMINO-2- [(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)OXY]- 3-HYDROXYCYCLOHEXYL 2-AMINO-2-DEOXY- ALPHA-D-GLUCOPYRANOSIDE	B	2O3X	0.75
TOY	TOBRAMYCIN	A,B	1M4D	0.71
TOY	TOBRAMYCIN	A,B	1LC4	0.71
GOO	(1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane- 1,2,3-triol	A	3DX4	0.82
GE1	3,4-DIDEOXY-2,6-AMINO-ALPHA-D GALACTOPYRANOSE	A	1BYJ	0.71
GLP	GLUCOSAMINE 6-PHOSPHATE	E,F,G,H,P,Q, R,S	2NZ4	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A	1MOQ	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A	3CXQ	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4A	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4C	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4B	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2VHL	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2Z75	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	X	2VF5	0.73
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2RI1	0.73
1GN	2-DEOXY-2-AMINOGALACTOSE	A,B	3GAL	0.8
NMY	NEOMYCIN	A	2B0Q	0.73
NMY	NEOMYCIN	4,B	2QP1	0.73
NMY	NEOMYCIN	A,B	2ET4	0.73
NMY	NEOMYCIN	A,E,N	2QAN	0.73
NMY	NEOMYCIN	A,B	2FCY	0.73
NMY	NEOMYCIN	A	2QP0	0.73
NMY	NEOMYCIN	A	1I9V	0.73
NMY	NEOMYCIN	A	2QAL	0.73
NMY	NEOMYCIN	4,B	2QOZ	0.73
NMY	NEOMYCIN	A,C	2A04	0.73
NMY	NEOMYCIN	A	1EI2	0.73
NMY	NEOMYCIN	A,B	3C7R	0.73
NMY	NEOMYCIN	4,B	2QAM	0.73
NMY	NEOMYCIN	4,B	2QAO	0.73
NMY	NEOMYCIN	A	2QOY	0.73
N33		A	2O3V	0.71
YHO	(1S,2S,3R,4R)-4-aminocyclopentane- 1,2,3-triol	A	3DX1	0.72
MUR	MURAMIC ACID	A,C,E,G	1LOD	0.71
GCN	3-DEOXY-D-GLUCOSAMINE	A	1FI1	0.8
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFG	0.8
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QKC	0.8
GCN	3-DEOXY-D-GLUCOSAMINE	A,B	2GRX	0.8
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QJQ	0.8
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFF	0.8
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1QD3	0.82
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1NEM	0.82
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1PBR	0.82
AOG	4-AMINO-2-OCTYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R82	0.81
GP4	GLUCOSAMINE 4-PHOSPHATE	A	1FCP	0.73
GP4	GLUCOSAMINE 4-PHOSPHATE	A,B,C	1Q9W	0.73
GP4	GLUCOSAMINE 4-PHOSPHATE	A	2FCP	0.73
AOL	(1R,2R,3S,4S,5R)-5-AMINOCYCLOPENTANE- 1,2,3,4-TETROL	A	2F7Q	0.74
KNC	KANAMYCIN C	A	1V0C	0.71
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	2TOB	0.77
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	1TOB	0.77
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1FQ9	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	B	2AXM	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1GMN	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1T8U	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFB	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	B,D,F,H	1XMN	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F, G,H	1GMO	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F	1AXM	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1XT3	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1QQP	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1RID	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1G5N	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	2BRS	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1HPN	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1ZA4	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1ZBA	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFC	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D	2VRA	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYV	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	H,I	3B9F	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	3DY0	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYU	0.73
SGN	N,O6-DISULFO-GLUCOSAMINE	B,C,D,E	1E0O	0.73
GE3	5-METHYL-4-METHYLAMINO-TETRAHYDRO- PYRAN-2,3,5-TRIOL	A	1BYJ	0.74
LIV		A,B	2ESJ	0.7
LIV		A,B	2FD0	0.7
LIV		A,B	3C5D	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B,C	1Q9W	0.73
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B	2OI6	0.73
GP1	GLUCOSAMINE 1-PHOSPHATE	A	2FCP	0.73
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1FCP	0.73
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1UJW	0.73
9CS	(1R,2S,3S,4R,6S)-4,6-DIAMINO-3- [(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]- 2-HYDROXYCYCLOHEXYL 2,6-DIAMINO- 2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE	A	2QIR	0.71
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2F4S	0.75
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	A,B	2FCX	0.75
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2ET8	0.75
KAN	KANAMYCIN A	A	1L8T	0.71
KAN	KANAMYCIN A	A,B	1M4I	0.71
KAN	KANAMYCIN A	A,B	1ND4	0.71
KAN	KANAMYCIN A	A,B	1KNY	0.71
KAN	KANAMYCIN A	A,B	2ESI	0.71
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1CPU	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1NM9	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFV	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1PIG	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	1Z32	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFU	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3BLK	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	3BLP	0.86
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3DHP	0.86
PAR	PAROMOMYCIN	A	1FYP	0.73
PAR	PAROMOMYCIN	V,Z	2J02	0.73
PAR	PAROMOMYCIN	Z	2UXD	0.73
PAR	PAROMOMYCIN	A,D,N,Y,Z	1N33	0.73
PAR	PAROMOMYCIN	V,Y,Z	2WDM	0.73
PAR	PAROMOMYCIN	Y,Z	2VQE	0.73
PAR	PAROMOMYCIN	A,D,L,N	1IBK	0.73
PAR	PAROMOMYCIN	Z	2UXB	0.73
PAR	PAROMOMYCIN	Y,Z	2UU9	0.73
PAR	PAROMOMYCIN	Z	2UXC	0.73
PAR	PAROMOMYCIN	A,D,N,X	1XMQ	0.73
PAR	PAROMOMYCIN	B	2O3W	0.73
PAR	PAROMOMYCIN	V,Y,Z	2WDG	0.73
PAR	PAROMOMYCIN	A	2Z4K	0.73
PAR	PAROMOMYCIN	4,B	2Z4N	0.73
PAR	PAROMOMYCIN	V,Y,Z	2WDK	0.73
PAR	PAROMOMYCIN	A,E	2Z4M	0.73
PAR	PAROMOMYCIN	A,B,C,D	3BNQ	0.73
PAR	PAROMOMYCIN	Y,Z	2UUB	0.73
PAR	PAROMOMYCIN	A,D,H,N	1FJG	0.73
PAR	PAROMOMYCIN	A,B	1J7T	0.73
PAR	PAROMOMYCIN	Y,Z	2UUA	0.73
PAR	PAROMOMYCIN	Y,Z	2UUC	0.73
PAR	PAROMOMYCIN	A,D,J,N,X	1XNQ	0.73
PAR	PAROMOMYCIN	A,D,E,J,M,N,Y	1N32	0.73
PAR	PAROMOMYCIN	A	2VQY	0.73
PAR	PAROMOMYCIN	A,B	3C44	0.73
PAR	PAROMOMYCIN	V,Z	2J00	0.73
PAR	PAROMOMYCIN	4,B	2Z4L	0.73
PAR	PAROMOMYCIN	V,Y,Z	2WDH	0.73
PAR	PAROMOMYCIN	A,D,J,N,Y	1IBL	0.73
PAR	PAROMOMYCIN	A,B,C,D	3BNR	0.73
PAR	PAROMOMYCIN	A,D,J,N,X	1XMO	0.73
PAR	PAROMOMYCIN	Y,Z	2VQF	0.73
PAR	PAROMOMYCIN	A,D,J,N,X	1XNR	0.73
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ9	0.77
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ4	0.77
AR4	2-AMINO-5-(3-FLUORO-3,4-DIHYDROXY- 5-HYDROXYMETHYL-TETRAHYDRO-FURAN- 2-YLOXY)-5-HYDROXY-PENTANOIC ACID	A,B,C	1S2D	0.76
GNS	N-SULFO-ALPHA-D-GLUCOSAMINE	A	2ERM	0.74
YTB	(1R,2R,3S,4R,5R)-5-aminocyclopentane- 1,2,3,4-tetrol	A	3DX3	0.74
MAT	2,4-DIDEOXY-4-[2-(PROPYL)AMINO]- 3-O-METHYL ALPHA-L-THREO-PENTOPYRANOSIDE	A,B	1PIK	0.71
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1QD3	0.82
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	B	1O9M	0.82
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1NEM	0.82
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	2PIK	0.86
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	6CGT	0.86
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A,B	1PIK	0.86
MYG	GLUCOSAMINYL-(ALPHA-6)-D-MYO-INOSITOL	A	1GYM	0.77
EMP	2,4-DIDEOXY-4-(ETHYLAMINO)-3-O- METHYL ALPHA-L-THREO-PENTOPYRANOSIDE	A	2PIK	0.71
TOA	3-DEOXY-3-AMINO GLUCOSE	A	1TOB	0.83
TOA	3-DEOXY-3-AMINO GLUCOSE	A	2TOB	0.83
RIO	RIBOSTAMYCIN	A,B	1M4G	0.75
RIO	RIBOSTAMYCIN	A,B	3C3Z	0.75
RIO	RIBOSTAMYCIN	A,B	1S3Z	0.75
RIO	RIBOSTAMYCIN	A,B,C,D	2FCZ	0.75
RIO	RIBOSTAMYCIN	A,B	2ET5	0.75
RIO	RIBOSTAMYCIN	A,B	3DVV	0.75
RIO	RIBOSTAMYCIN	A	2BUE	0.75
GDA	4-DEOXY-4-AMINO-BETA-D-GLUCOSE	A,B	1OCB	0.84
GCS	D-GLUCOSAMINE	A	3CO4	0.8
GCS	D-GLUCOSAMINE	A	1QGI	0.8
GCS	D-GLUCOSAMINE	A,B	2VZS	0.8
GCS	D-GLUCOSAMINE	A	1E9L	0.8
GCS	D-GLUCOSAMINE	A,B,C,D	3FXI	0.8
GCS	D-GLUCOSAMINE	A,B	2VZV	0.8
NGO	2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY- ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3- OXAZOLE	A,B,C,D	1E6Z	0.73
PA1	PAROMOMYCIN (RING 1)	A	1PBR	0.8
PA1	PAROMOMYCIN (RING 1)	A	1QKC	0.8
PA1	PAROMOMYCIN (RING 1)	A	1QFG	0.8
PA1	PAROMOMYCIN (RING 1)	A	1FI1	0.8
PA1	PAROMOMYCIN (RING 1)	A,B,C,D	3FXI	0.8
PA1	PAROMOMYCIN (RING 1)	A	1QFF	0.8
NNG	2-DEOXY-2-{[(S)-HYDROXY(METHYL)PHOSPHORYL]AMINO}- 6-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE	A,B	2P53	0.7
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7Y	0.85
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7X	0.85
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R81	0.85
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7V	0.85
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R80	0.85