MMsInc Molecule/ Ligand PDB

Ligands with its PDB code and its tanimoto calculated from the molecule, present in the database, which has for MMscode: MMs02401223

You can sort the columns by Ligand, Ligand name, PDB and Tanimoto.

Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
Ligand	Ligand name	Chain	PDB	Tanimoto	Ligand in PDB
GDA	4-DEOXY-4-AMINO-BETA-D-GLUCOSE	A,B	1OCB	0.81
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ9	0.79
AD7	octyl 3-amino-3-deoxy-2-O-(2,6- dideoxy-alpha-L-lyxo-hexopyranosyl)- beta-D-galactopyranoside	A	2RJ4	0.79
GP4	GLUCOSAMINE 4-PHOSPHATE	A	1FCP	0.7
GP4	GLUCOSAMINE 4-PHOSPHATE	A,B,C	1Q9W	0.7
GP4	GLUCOSAMINE 4-PHOSPHATE	A	2FCP	0.7
GCS	D-GLUCOSAMINE	A	3CO4	0.77
GCS	D-GLUCOSAMINE	A	1QGI	0.77
GCS	D-GLUCOSAMINE	A,B	2VZS	0.77
GCS	D-GLUCOSAMINE	A	1E9L	0.77
GCS	D-GLUCOSAMINE	A,B,C,D	3FXI	0.77
GCS	D-GLUCOSAMINE	A,B	2VZV	0.77
PA1	PAROMOMYCIN (RING 1)	A	1PBR	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QKC	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QFG	0.77
PA1	PAROMOMYCIN (RING 1)	A	1FI1	0.77
PA1	PAROMOMYCIN (RING 1)	A,B,C,D	3FXI	0.77
PA1	PAROMOMYCIN (RING 1)	A	1QFF	0.77
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B,C	1Q9W	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A,B	2OI6	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	2FCP	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1FCP	0.7
GP1	GLUCOSAMINE 1-PHOSPHATE	A	1UJW	0.7
MYG	GLUCOSAMINYL-(ALPHA-6)-D-MYO-INOSITOL	A	1GYM	0.79
NMY	NEOMYCIN	A	2B0Q	0.75
NMY	NEOMYCIN	4,B	2QP1	0.75
NMY	NEOMYCIN	A,B	2ET4	0.75
NMY	NEOMYCIN	A,E,N	2QAN	0.75
NMY	NEOMYCIN	A,B	2FCY	0.75
NMY	NEOMYCIN	A	2QP0	0.75
NMY	NEOMYCIN	A	1I9V	0.75
NMY	NEOMYCIN	A	2QAL	0.75
NMY	NEOMYCIN	4,B	2QOZ	0.75
NMY	NEOMYCIN	A,C	2A04	0.75
NMY	NEOMYCIN	A	1EI2	0.75
NMY	NEOMYCIN	A,B	3C7R	0.75
NMY	NEOMYCIN	4,B	2QAM	0.75
NMY	NEOMYCIN	4,B	2QAO	0.75
NMY	NEOMYCIN	A	2QOY	0.75
AOG	4-AMINO-2-OCTYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R82	0.83
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1FQ9	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B	2AXM	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1GMN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1T8U	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFB	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B,D,F,H	1XMN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F, G,H	1GMO	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D,E,F	1AXM	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1XT3	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1QQP	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	1RID	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1G5N	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	2BRS	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1HPN	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1ZA4	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	1	1ZBA	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	1BFC	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B,C,D	2VRA	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYV	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	H,I	3B9F	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A,B	3DY0	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	A	2HYU	0.7
SGN	N,O6-DISULFO-GLUCOSAMINE	B,C,D,E	1E0O	0.7
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7Y	0.87
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7X	0.87
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R81	0.87
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R7V	0.87
AIG	4-AMINO-2-HEXYLOXY-6-HYDROXYMETHYL- TETRAHYDRO-PYRAN-3,5-DIOL	A	1R80	0.87
LIV		A,B	2ESJ	0.72
LIV		A,B	2FD0	0.72
LIV		A,B	3C5D	0.72
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	2PIK	0.82
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A	6CGT	0.82
DAG	4,6-DIDEOXY-4-AMINO-BETA-D-GLUCOPYRANOSIDE	A,B	1PIK	0.82
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1QD3	0.78
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	B	1O9M	0.78
BDG	O-2,6-DIAMINO-2,6-DIDEOXY-ALPHA- D-GLUCOPYRANOSE	A	1NEM	0.78
KAN	KANAMYCIN A	A	1L8T	0.73
KAN	KANAMYCIN A	A,B	1M4I	0.73
KAN	KANAMYCIN A	A,B	1ND4	0.73
KAN	KANAMYCIN A	A,B	1KNY	0.73
KAN	KANAMYCIN A	A,B	2ESI	0.73
MGS	1,2-O-DIMETHYL-4-[2,4-DIHYDROXY- BUTYRAMIDO]-4,6-DIDEOXY-ALPHA-D- MANNOPYRANOSIDE	H	1F4X	0.7
GNS	N-SULFO-ALPHA-D-GLUCOSAMINE	A	2ERM	0.71
ABL	6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY- 6-HYDROXYMETHYL-TETRAHYDRO-PYRAN- 2-YLOXY)-PIPERIDINE-2,3,4-TRIOL	A,B	1NAA	0.72
ABL	6-HYDROXYMETHYL-5-(3,4,5-TRIHYDROXY- 6-HYDROXYMETHYL-TETRAHYDRO-PYRAN- 2-YLOXY)-PIPERIDINE-2,3,4-TRIOL	A	2AXR	0.72
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1CPU	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1NM9	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFV	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1PIG	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	1Z32	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	1MFU	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3BLK	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	X	3BLP	0.82
AGL	4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE	A	3DHP	0.82
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	2TOB	0.77
TOC	2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE	A	1TOB	0.77
GOO	(1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane- 1,2,3-triol	A	3DX4	0.76
GLP	GLUCOSAMINE 6-PHOSPHATE	E,F,G,H,P,Q, R,S	2NZ4	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A	1MOQ	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A	3CXQ	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4A	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4C	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	3B4B	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2VHL	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2Z75	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	X	2VF5	0.7
GLP	GLUCOSAMINE 6-PHOSPHATE	A,B	2RI1	0.7
N30	(1R,2R,3S,4R,6S)-4,6-DIAMINO-2- [(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)OXY]- 3-HYDROXYCYCLOHEXYL 2-AMINO-2-DEOXY- ALPHA-D-GLUCOPYRANOSIDE	B	2O3X	0.77
TOA	3-DEOXY-3-AMINO GLUCOSE	A	1TOB	0.79
TOA	3-DEOXY-3-AMINO GLUCOSE	A	2TOB	0.79
KNC	KANAMYCIN C	A	1V0C	0.73
B19	N-{[(3AS,5AR,8AR,8BS)-2,2,7,7-TETRAMETHYLTETRAHYDRO- 3AH-BIS[1,3]DIOXOLO[4,5-B:4',5'- D]PYRAN-3A-YL]METHYL}SULFAMIDE	A	2H15	0.75
PAR	PAROMOMYCIN	A	1FYP	0.75
PAR	PAROMOMYCIN	V,Z	2J02	0.75
PAR	PAROMOMYCIN	Z	2UXD	0.75
PAR	PAROMOMYCIN	A,D,N,Y,Z	1N33	0.75
PAR	PAROMOMYCIN	V,Y,Z	2WDM	0.75
PAR	PAROMOMYCIN	Y,Z	2VQE	0.75
PAR	PAROMOMYCIN	A,D,L,N	1IBK	0.75
PAR	PAROMOMYCIN	Z	2UXB	0.75
PAR	PAROMOMYCIN	Y,Z	2UU9	0.75
PAR	PAROMOMYCIN	Z	2UXC	0.75
PAR	PAROMOMYCIN	A,D,N,X	1XMQ	0.75
PAR	PAROMOMYCIN	B	2O3W	0.75
PAR	PAROMOMYCIN	V,Y,Z	2WDG	0.75
PAR	PAROMOMYCIN	A	2Z4K	0.75
PAR	PAROMOMYCIN	4,B	2Z4N	0.75
PAR	PAROMOMYCIN	V,Y,Z	2WDK	0.75
PAR	PAROMOMYCIN	A,E	2Z4M	0.75
PAR	PAROMOMYCIN	A,B,C,D	3BNQ	0.75
PAR	PAROMOMYCIN	Y,Z	2UUB	0.75
PAR	PAROMOMYCIN	A,D,H,N	1FJG	0.75
PAR	PAROMOMYCIN	A,B	1J7T	0.75
PAR	PAROMOMYCIN	Y,Z	2UUA	0.75
PAR	PAROMOMYCIN	Y,Z	2UUC	0.75
PAR	PAROMOMYCIN	A,D,J,N,X	1XNQ	0.75
PAR	PAROMOMYCIN	A,D,E,J,M,N,Y	1N32	0.75
PAR	PAROMOMYCIN	A	2VQY	0.75
PAR	PAROMOMYCIN	A,B	3C44	0.75
PAR	PAROMOMYCIN	V,Z	2J00	0.75
PAR	PAROMOMYCIN	4,B	2Z4L	0.75
PAR	PAROMOMYCIN	V,Y,Z	2WDH	0.75
PAR	PAROMOMYCIN	A,D,J,N,Y	1IBL	0.75
PAR	PAROMOMYCIN	A,B,C,D	3BNR	0.75
PAR	PAROMOMYCIN	A,D,J,N,X	1XMO	0.75
PAR	PAROMOMYCIN	Y,Z	2VQF	0.75
PAR	PAROMOMYCIN	A,D,J,N,X	1XNR	0.75
MUR	MURAMIC ACID	A,C,E,G	1LOD	0.73
AR4	2-AMINO-5-(3-FLUORO-3,4-DIHYDROXY- 5-HYDROXYMETHYL-TETRAHYDRO-FURAN- 2-YLOXY)-5-HYDROXY-PENTANOIC ACID	A,B,C	1S2D	0.71
RIO	RIBOSTAMYCIN	A,B	1M4G	0.77
RIO	RIBOSTAMYCIN	A,B	3C3Z	0.77
RIO	RIBOSTAMYCIN	A,B	1S3Z	0.77
RIO	RIBOSTAMYCIN	A,B,C,D	2FCZ	0.77
RIO	RIBOSTAMYCIN	A,B	2ET5	0.77
RIO	RIBOSTAMYCIN	A,B	3DVV	0.77
RIO	RIBOSTAMYCIN	A	2BUE	0.77
9CS	(1R,2S,3S,4R,6S)-4,6-DIAMINO-3- [(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]- 2-HYDROXYCYCLOHEXYL 2,6-DIAMINO- 2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE	A	2QIR	0.73
EAG	2-aminoethyl 2-(acetylamino)-2- deoxy-beta-D-glucopyranoside	B,D,E,F,H	3BZ4	0.7
GCN	3-DEOXY-D-GLUCOSAMINE	A	1FI1	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFG	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QKC	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A,B	2GRX	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QJQ	0.77
GCN	3-DEOXY-D-GLUCOSAMINE	A	1QFF	0.77
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1QD3	0.78
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1NEM	0.78
IDG	O-2,6-DIAMINO-2,6-DIDEOXY-BETA- L-IDOPYRANOSE	A	1PBR	0.78
TOY	TOBRAMYCIN	A,B	1M4D	0.73
TOY	TOBRAMYCIN	A,B	1LC4	0.73
1GN	2-DEOXY-2-AMINOGALACTOSE	A,B	3GAL	0.77
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1M7D	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1LED	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1GSL	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1FWU	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A,B,C,D	1G1R	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1FWV	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A	1G1T	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	1,2,3	3KMB	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	1,2,3	2KMB	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A,B	1ZPL	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	1,2,3	4KMB	0.71
MAG	BETA-METHYL-N-ACETYL-D-GLUCOSAMINE	A,H	1UZ8	0.71
N33		A	2O3V	0.73
MGC	ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE	A,C,E,G	1UH1	0.71
MGC	ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE	A,B,C,D	2DU1	0.71
MGC	ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE	A,C,E,G	1UH0	0.71
MGC	ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE	A,B,C,D	2DVA	0.71
MGC	ALPHA-METHYL-N-ACETYL-D-GALACTOSAMINE	A	1UGX	0.71
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2F4S	0.77
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	A,B	2FCX	0.77
XXX	(2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)- 4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)- 5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO- 2H-PYRAN-3,4-DIOL	B	2ET8	0.77
NGO	2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY- ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3- OXAZOLE	A,B,C,D	1E6Z	0.73
NNG	2-DEOXY-2-{[(S)-HYDROXY(METHYL)PHOSPHORYL]AMINO}- 6-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE	A,B	2P53	0.7